FIRE

PB-CD14+Monocytes_PB-CD14+Monocytes.txt

Summary

FIRE has discovered 6 motifs from the query data, consisting of 6 from DNA and 0 from RNA.

DNA results

Figures

FIRE p-value matrix PDF PNG EPS

FIRE density matrix PDF PNG EPS

FIRE motif interaction matrix PDF PNG EPS

Motif maps

Motif	Location	Position    bias	Orientation bias	Maps
.[AC]CGGAAG.	5'			PDF	PNG	EPS
[CGT]ACG[AGT][CG]AC[CGT]	5'			PDF	PNG	EPS
[ACT][AT][AT]ATATA[ACT]	5'			PDF	PNG	EPS
[ACT][AGT]TCGCGA[ACG]	5'		Y	PDF	PNG	EPS
[CGT]CCGT[AC]CA.	5'			PDF	PNG	EPS
[ACG][AC]T[AT]ACG[CGT].	5'			PDF	PNG	EPS

Additional information

Best GO enrichments for motifs

All GO enrichments for motifs

All motif occurrences of motifs predicted by FIRE, sorted by putative functionality

Reference

FIRE is a motif discovery and characterization program based on mutual information.