FIRE

PB-CD19+Bcells_PB-CD19+Bcells.txt

Summary

FIRE has discovered 11 motifs from the query data, consisting of 11 from DNA and 0 from RNA.

DNA results

Figures

FIRE p-value matrix PDF PNG EPS

FIRE density matrix PDF PNG EPS

FIRE motif interaction matrix PDF PNG EPS

Motif maps

Motif	Location	Position    bias	Orientation bias	Maps
.[CG]CGGAAG[ACT]	5'			PDF	PNG	EPS
T[CGT][AT]CGC[AGT]A.	5'			PDF	PNG	EPS
[AGT]ACG[AGT]CA..	5'		Y	PDF	PNG	EPS
.[ACG]CG[AC][CG]TA[AC]	5'		Y	PDF	PNG	EPS
[AC].TGCGCA.	5'			PDF	PNG	EPS
.ACG[AG]AA[CGT].	5'			PDF	PNG	EPS
[CT][CG]GCCGT[AC].	5'			PDF	PNG	EPS
[ACT]AT[GT]GCGG[AC]	5'			PDF	PNG	EPS
.CG[ACT]A[CG]TA.	5'			PDF	PNG	EPS
[CG]TA[AG]CGG[AC][ACG]	5'			PDF	PNG	EPS
[CG]CG[ACT]AAC[ACT][ACT]	5'			PDF	PNG	EPS

Additional information

Best GO enrichments for motifs

All GO enrichments for motifs

All motif occurrences of motifs predicted by FIRE, sorted by putative functionality

Reference

FIRE is a motif discovery and characterization program based on mutual information.