PB-CD8+Tcells_PB-CD8+Tcells.txt
Summary
FIRE has discovered 9 motifs from the query data, consisting of 9 from DNA and 0 from RNA.
DNA results
- Figures
- FIRE p-value matrix PDF PNG EPS
- FIRE density matrix PDF PNG EPS
- FIRE motif interaction matrix PDF PNG EPS
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- Motif maps
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Motif Location Position
biasOrientation
biasMaps .CCGGAA[AG]. 5' Y PDF PNG EPS T[ACT][AT][CT]GCGA[ACG] 5' PDF PNG EPS [AGT]CA[GT][AGT]CGC[AG] 5' Y PDF PNG EPS [ACG][ACG]CGT[CT]A[AC][CG] 5' PDF PNG EPS [CGT]TACG[ACG][CT][ACT][ACT] 5' Y PDF PNG EPS [AGT]C[GT][CG]CGAA. 5' PDF PNG EPS .CGC[ACT][AG]TA[CGT] 5' Y PDF PNG EPS [ACG]AA[CG]GCGG. 5' PDF PNG EPS [ACT]TG[AT]T[AG]TC[AGT] 5' PDF PNG EPS
- Additional information
- Best GO enrichments for motifs
- All GO enrichments for motifs
- All motif occurrences of motifs predicted by FIRE, sorted by putative functionality
Reference
FIRE is a motif discovery and characterization program based on mutual information.