FIRE

leukemialymphoblasticmolt4_leukemialymphoblasticmolt4.txt

Summary

FIRE has discovered 5 motifs from the query data, consisting of 5 from DNA and 0 from RNA.

DNA results

Figures

FIRE p-value matrix PDF PNG EPS

FIRE density matrix PDF PNG EPS

FIRE motif interaction matrix PDF PNG EPS

Motif maps

Motif	Location	Position    bias	Orientation bias	Maps
.[ACG]CGGAAG[ACT]	5'			PDF	PNG	EPS
[ACG].[ACT]TCGT[AT][CGT]	5'			PDF	PNG	EPS
[CGT]CGTTAC[CGT].	5'		Y	PDF	PNG	EPS
.[CGT]TA[CT]GCG.	5'			PDF	PNG	EPS
.[AC]AGA[GT]AG[AT]	5'			PDF	PNG	EPS

Additional information

Best GO enrichments for motifs

All GO enrichments for motifs

All motif occurrences of motifs predicted by FIRE, sorted by putative functionality

Reference

FIRE is a motif discovery and characterization program based on mutual information.