FIRE

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leukemialymphoblasticmolt4_leukemialymphoblasticmolt4.txt

Summary

FIRE has discovered 5 motifs from the query data, consisting of 5 from DNA and 0 from RNA.

DNA results

Figures
FIRE p-value matrix PDF PNG EPS
FIRE density matrix PDF PNG EPS
FIRE motif interaction matrix PDF PNG EPS
Motif maps
Motif Location    Position   
bias
Orientation
bias
Maps
.[ACG]CGGAAG[ACT]5' PDF PNG EPS
[ACG].[ACT]TCGT[AT][CGT]5' PDF PNG EPS
[CGT]CGTTAC[CGT].5'Y PDF PNG EPS
.[CGT]TA[CT]GCG.5' PDF PNG EPS
.[AC]AGA[GT]AG[AT]5' PDF PNG EPS
Additional information
Best GO enrichments for motifs
All GO enrichments for motifs
All motif occurrences of motifs predicted by FIRE, sorted by putative functionality

Reference

FIRE is a motif discovery and characterization program based on mutual information.