mal_arr18_TP_18_ALL.txt
Summary
FIRE has discovered 8 motifs from the query data, consisting of 8 from DNA and 0 from RNA.
DNA results
- Figures
- FIRE p-value matrix PDF PNG EPS
- FIRE density matrix PDF PNG EPS
- FIRE motif interaction matrix PDF PNG EPS
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- Motif maps
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Motif Location Position
biasOrientation
biasMaps .ATGTGTA. 5' Y PDF PNG EPS [ACT][AG][AGT]AGAC[AG]. 5' PDF PNG EPS .TGC[AG]C[ACT][ACG]. 5' PDF PNG EPS .[ACT]TCTACA[AGT] 5' PDF PNG EPS .ATATAGA. 5' PDF PNG EPS [AGT]A[GT][AC]TAGG. 5' PDF PNG EPS .[GT][ACT]TGTCC[AT] 5' Y PDF PNG EPS .AACCAA[AGT]. 5' PDF PNG EPS
- Additional information
- Best GO enrichments for motifs
- All GO enrichments for motifs
- All motif occurrences of motifs predicted by FIRE, sorted by putative functionality
Reference
FIRE is a motif discovery and characterization program based on mutual information.