FIRE

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mal_arr19_TP_19_ALL.txt

Summary

FIRE has discovered 7 motifs from the query data, consisting of 7 from DNA and 0 from RNA.

DNA results

Figures
FIRE p-value matrix PDF PNG EPS
FIRE density matrix PDF PNG EPS
FIRE motif interaction matrix PDF PNG EPS
Motif maps
Motif Location    Position   
bias
Orientation
bias
Maps
.[ACT][AT]AGACA.5' PDF PNG EPS
.ATGTGTA.5'Y PDF PNG EPS
.TGC[AG]C[ACT][ACG].5' PDF PNG EPS
.[CGT][AG]CAACC.5' PDF PNG EPS
.ATATAGA.5' PDF PNG EPS
[AGT]A[GT]GT[AC]G[AG][AGT]5' PDF PNG EPS
.[ACG][ACG]CATGC.5'Y PDF PNG EPS
Additional information
Best GO enrichments for motifs
All GO enrichments for motifs
All motif occurrences of motifs predicted by FIRE, sorted by putative functionality

Reference

FIRE is a motif discovery and characterization program based on mutual information.