mal_arr36_TP_38_ALL.txt
Summary
FIRE has discovered 10 motifs from the query data, consisting of 10 from DNA and 0 from RNA.
DNA results
- Figures
- FIRE p-value matrix PDF PNG EPS
- FIRE density matrix PDF PNG EPS
- FIRE motif interaction matrix PDF PNG EPS
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- Motif maps
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Motif Location Position
biasOrientation
biasMaps .T[AG][CG][AG]CAC. 5' PDF PNG EPS .A[AGT]AGAC[AG]. 5' PDF PNG EPS .[ACT][AGT]GTGCA. 5' Y PDF PNG EPS .[CGT][CT][ACG]GAC[AC]. 5' PDF PNG EPS [ACT]TAC[AG]C[AC]A. 5' PDF PNG EPS ..CA[CGT]GCA. 5' Y PDF PNG EPS .[AC]TAAGAC[AG] 5' PDF PNG EPS [ACT]TCTATAA[AT] 5' PDF PNG EPS
- Additional information
- Best GO enrichments for motifs
- All GO enrichments for motifs
- All motif occurrences of motifs predicted by FIRE, sorted by putative functionality
Reference
FIRE is a motif discovery and characterization program based on mutual information.