FIRE

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mal_arr38_TP_40_ALL.txt

Summary

FIRE has discovered 8 motifs from the query data, consisting of 8 from DNA and 0 from RNA.

DNA results

Figures
FIRE p-value matrix PDF PNG EPS
FIRE density matrix PDF PNG EPS
FIRE motif interaction matrix PDF PNG EPS
Motif maps
Motif Location    Position   
bias
Orientation
bias
Maps
.[AG][ACT]AGACA.5' PDF PNG EPS
..TGCAC[ACG].5' PDF PNG EPS
.ACAC[AG]CA.5' PDF PNG EPS
.[ACG]CATGC..5' PDF PNG EPS
.[AG]T[CT]ACAC.5' PDF PNG EPS
[AC]AC[AC]AC[ACT][AC].5' PDF PNG EPS
Additional information
Best GO enrichments for motifs
All GO enrichments for motifs
All motif occurrences of motifs predicted by FIRE, sorted by putative functionality

Reference

FIRE is a motif discovery and characterization program based on mutual information.