FIRE

mal_arr42_TP_44_ALL.txt

Summary

FIRE has discovered 5 motifs from the query data, consisting of 5 from DNA and 0 from RNA.

DNA results

Figures

FIRE p-value matrix PDF PNG EPS

FIRE density matrix PDF PNG EPS

FIRE motif interaction matrix PDF PNG EPS

Motif maps

Motif	Location	Position    bias	Orientation bias	Maps
[AGT][AT][AT]AGACA.	5'			PDF	PNG	EPS
.[ACG]C[AG][CGT]GC[AG].	5'			PDF	PNG	EPS
.ATATAGA.	5'			PDF	PNG	EPS
.[CGT][AG][CG]AACC[ACG]	5'			PDF	PNG	EPS
[ACT][AGT][AC]TGC[AG]C[ACG]	5'			PDF	PNG	EPS

Additional information

Best GO enrichments for motifs

All GO enrichments for motifs

All motif occurrences of motifs predicted by FIRE, sorted by putative functionality

Reference

FIRE is a motif discovery and characterization program based on mutual information.