FIRE

B220+_B-cells_B220+_B-cells.txt

Summary

FIRE has discovered 12 motifs from the query data, consisting of 12 from DNA and 0 from RNA.

DNA results

Figures

FIRE p-value matrix PDF PNG EPS

FIRE density matrix PDF PNG EPS

FIRE motif interaction matrix PDF PNG EPS

Motif maps

Motif	Location	Position    bias	Orientation bias	Maps
.[CG]CGGAAG.	5'	Y		PDF	PNG	EPS
.CGT[AT]T[AC][CG][CGT]	5'			PDF	PNG	EPS
[ACG][AT][CT]TACG.[ACT]	5'		Y	PDF	PNG	EPS
.[CG]CG[AC]TAC.	5'			PDF	PNG	EPS
.AT[CT][AGT]CGC[AG]	5'			PDF	PNG	EPS
[ACG].TCGCAG[AC]	5'			PDF	PNG	EPS
[CGT]T[GT]A[AGT]CG[CT].	5'			PDF	PNG	EPS
.CGCGTGC.	5'			PDF	PNG	EPS
.AAGCGA[ACT].	5'			PDF	PNG	EPS
[CG][CT]CA[CG]CGA.	5'			PDF	PNG	EPS
[ACG]CGG[CGT]A[AT]A.	5'	Y		PDF	PNG	EPS
[ACG]A[AGT]CATCA.	5'		Y	PDF	PNG	EPS

Additional information

Best GO enrichments for motifs

All GO enrichments for motifs

All motif occurrences of motifs predicted by FIRE, sorted by putative functionality

Reference

FIRE is a motif discovery and characterization program based on mutual information.