FIRE

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epidermis_epidermis.txt

Summary

FIRE has discovered 5 motifs from the query data, consisting of 5 from DNA and 0 from RNA.

DNA results

Figures
FIRE p-value matrix PDF PNG EPS
FIRE density matrix PDF PNG EPS
FIRE motif interaction matrix PDF PNG EPS
Motif maps
Motif Location    Position   
bias
Orientation
bias
Maps
.CCGGA[AT][GT].5' PDF PNG EPS
[CGT][AC]G[GT]CGCA[ACT]5'Y PDF PNG EPS
[ACG][AC]AACG[AC]C.5' PDF PNG EPS
.A[ACG]TGGCG[CGT]5'Y PDF PNG EPS
.GT[ACT]CGCC[ACT]5' PDF PNG EPS
Additional information
Best GO enrichments for motifs
All GO enrichments for motifs
All motif occurrences of motifs predicted by FIRE, sorted by putative functionality

Reference

FIRE is a motif discovery and characterization program based on mutual information.