FIRE

EXPT126.txt

Summary

FIRE has discovered 3 motifs from the query data, consisting of 3 from DNA and 0 from RNA.

DNA results

Figures

FIRE p-value matrix PDF PNG EPS

FIRE density matrix PDF PNG EPS

FIRE motif interaction matrix PDF PNG EPS

Motif maps

Motif	Location	Position    bias	Orientation bias	Maps
.CG[ACG][CGT]ACC.	5'			PDF	PNG	EPS
.[AG]CG[AC]GGA.	5'			PDF	PNG	EPS
.[AC]G[AC]G[AT]CG[ACG]	5'		Y	PDF	PNG	EPS

Additional information

Best GO enrichments for motifs

All GO enrichments for motifs

All motif occurrences of motifs predicted by FIRE, sorted by putative functionality

Reference

FIRE is a motif discovery and characterization program based on mutual information.