FIRE

Back to FIRE home page

EXPT215.txt

Summary

FIRE has discovered 4 motifs from the query data, consisting of 4 from DNA and 0 from RNA.

DNA results

Figures
FIRE p-value matrix PDF PNG EPS
FIRE density matrix PDF PNG EPS
FIRE motif interaction matrix PDF PNG EPS
Motif maps
Motif Location    Position   
bias
Orientation
bias
Maps
[ACG][ACT][AG]CGCG[CT][CGT]5' PDF PNG EPS
.CG[AC]GACC.5'Y PDF PNG EPS
[AC]A[AG]TCG[AG]T[AT]5' PDF PNG EPS
[AG]CGA[AC]GA[ACT].5' PDF PNG EPS
Additional information
Best GO enrichments for motifs
All GO enrichments for motifs
All motif occurrences of motifs predicted by FIRE, sorted by putative functionality

Reference

FIRE is a motif discovery and characterization program based on mutual information.