FIRE

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EXPT222.txt

Summary

FIRE has discovered 4 motifs from the query data, consisting of 4 from DNA and 0 from RNA.

DNA results

Figures
FIRE p-value matrix PDF PNG EPS
FIRE density matrix PDF PNG EPS
FIRE motif interaction matrix PDF PNG EPS
Motif maps
Motif Location    Position   
bias
Orientation
bias
Maps
[GT]CC[ACG]GG[GT]A.5' PDF PNG EPS
[GT]C[CG]AGACC[ACT]5' PDF PNG EPS
[ACT]AA[ACG][AC]GCG[AC]5' PDF PNG EPS
.CC[AG]ACG[AC][CGT]5' PDF PNG EPS
Additional information
Best GO enrichments for motifs
All GO enrichments for motifs
All motif occurrences of motifs predicted by FIRE, sorted by putative functionality

Reference

FIRE is a motif discovery and characterization program based on mutual information.