FIRE

EXPT247.txt

Summary

FIRE has discovered 10 motifs from the query data, consisting of 10 from DNA and 0 from RNA.

DNA results

Figures

FIRE p-value matrix PDF PNG EPS

FIRE density matrix PDF PNG EPS

FIRE motif interaction matrix PDF PNG EPS

Motif maps

Motif	Location	Position    bias	Orientation bias	Maps
[ACG][AG]A[GT]CGAT[AT]	5'	Y		PDF	PNG	EPS
[AGT]CG[ACT]G[AG]CC.	5'			PDF	PNG	EPS
.[AG]ACGC[GT]C.	5'		Y	PDF	PNG	EPS
.TTC[AG]CG[CG].	5'	Y		PDF	PNG	EPS
[ACT]TC[AGT]TCGA[AGT]	5'		Y	PDF	PNG	EPS
[ACT]T[ACT]C[AG]CGA.	5'			PDF	PNG	EPS
.CGA[AG][CG]G[AG][ACT]	5'			PDF	PNG	EPS
.TG[AC]GC[CGT]C[CGT]	5'		Y	PDF	PNG	EPS
[ACT]AATCAATA	5'			PDF	PNG	EPS
[CG]ATTT[AT]CG.	5'			PDF	PNG	EPS

Additional information

Best GO enrichments for motifs

All GO enrichments for motifs

All motif occurrences of motifs predicted by FIRE, sorted by putative functionality

Reference

FIRE is a motif discovery and characterization program based on mutual information.