EXPT381.txt
Summary
FIRE has discovered 7 motifs from the query data, consisting of 3 from DNA and 4 from RNA.
Combined DNA and RNA results
- Figures
- FIRE p-value matrix PDF PNG EPS
- FIRE density matrix PDF PNG EPS
- FIRE motif interaction matrix PDF PNG EPS
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- Motif maps
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Motif Location Position
biasOrientation
biasMaps .[GU][CU][CU]CUC[CU][CU] 3'UTR Y PDF PNG EPS .CG[AC]GAC[CG]. 5' Y PDF PNG EPS [AGU][AGU]UCCCC[AGU]. 3'UTR Y PDF PNG EPS [CGU]U[AC]U[CGU]UAU[CGU] 3'UTR Y PDF PNG EPS .AAACG[AC]G[ACG] 5' PDF PNG EPS .ACG[AC]AGA. 5' PDF PNG EPS .CC[AU]UCC[CU][ACU] 3'UTR Y PDF PNG EPS
Additional information for DNA motifs
- Best GO enrichments for motifs
- All GO enrichments for motifs
- All motif occurrences of motifs predicted by FIRE, sorted by putative functionality
Additional information for RNA motifs
- Best GO enrichments for motifs
- All GO enrichments for motifs
- All motif occurrences of motifs predicted by FIRE, sorted by putative functionality
Reference
FIRE is a motif discovery and characterization program based on mutual information.