FIRE

EXPT77.txt

Summary

FIRE has discovered 5 motifs from the query data, consisting of 5 from DNA and 0 from RNA.

DNA results

Figures

FIRE p-value matrix PDF PNG EPS

FIRE density matrix PDF PNG EPS

FIRE motif interaction matrix PDF PNG EPS

Motif maps

Motif	Location	Position    bias	Orientation bias	Maps
[AGT]CG[AC]G[AG][AC]C.	5'			PDF	PNG	EPS
T[CT]TCGCAA[CT]	5'			PDF	PNG	EPS
[AGT]CGCTC[ACT][AGT][CT]	5'		Y	PDF	PNG	EPS
.ACGCGC[ACG][ACG]	5'			PDF	PNG	EPS
[ACG][AG]A[GT]CGAT[AGT]	5'			PDF	PNG	EPS

Additional information

Best GO enrichments for motifs

All GO enrichments for motifs

All motif occurrences of motifs predicted by FIRE, sorted by putative functionality

Reference

FIRE is a motif discovery and characterization program based on mutual information.