FIRE

Back to FIRE home page

Arr_111_diauxicshifttimecourse185h.txt

Summary

FIRE has discovered 3 motifs from the query data, consisting of 3 from DNA and 0 from RNA.

DNA results

Figures
FIRE p-value matrix PDF PNG EPS
FIRE density matrix PDF PNG EPS
FIRE motif interaction matrix PDF PNG EPS
Motif maps
Motif Location    Position   
bias
Orientation
bias
Maps
[ACG]CCCCT[AGT]..5'Y PDF PNG EPS
[CGT]CTCATC[GT]C5'Y PDF PNG EPS
[ACT][AGT]TAAGGG[ACG]5'Y PDF PNG EPS
Additional information
Best GO enrichments for motifs
All GO enrichments for motifs
All motif occurrences of motifs predicted by FIRE, sorted by putative functionality

Reference

FIRE is a motif discovery and characterization program based on mutual information.