FIRE

Arr_115_YPD6hypd2.txt

Summary

FIRE has discovered 6 motifs from the query data, consisting of 6 from DNA and 0 from RNA.

DNA results

Figures

FIRE p-value matrix PDF PNG EPS

FIRE density matrix PDF PNG EPS

FIRE motif interaction matrix PDF PNG EPS

Motif maps

Motif	Location	Position    bias	Orientation bias	Maps
[CGT]CTCATC[GT][AC]	5'	Y		PDF	PNG	EPS
.CCCCT[AGT][AGT].	5'	Y		PDF	PNG	EPS
..CCCC[CG][CG][ACG]	5'			PDF	PNG	EPS
.C[CG]CTT[AG][AT][AT]	5'			PDF	PNG	EPS
[AT]AATTTT[AC][ACT]	5'	Y	Y	PDF	PNG	EPS
[AC][AG]ACGCG[AT][ACG]	5'			PDF	PNG	EPS

Combined motif maps for co-localizing motifs

Motif 1

Motif 2

Location

Maps

Additional information

Best GO enrichments for motifs

All GO enrichments for motifs

All motif occurrences of motifs predicted by FIRE, sorted by putative functionality

Reference

FIRE is a motif discovery and characterization program based on mutual information.