Arr_118_YPD12hypd2.txt
Summary
FIRE has discovered 8 motifs from the query data, consisting of 8 from DNA and 0 from RNA.
DNA results
- Figures
- FIRE p-value matrix PDF PNG EPS
- FIRE density matrix PDF PNG EPS
- FIRE motif interaction matrix PDF PNG EPS
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- Motif maps
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Motif Location Position
biasOrientation
biasMaps AAAAATTT[CT] 5' Y PDF PNG EPS .CCCCT[AGT][AGT]. 5' Y PDF PNG EPS A[CT]CC[AG][AT][AG]CA 5' Y Y PDF PNG EPS .CCCT[CT]A[AT]. 5' Y PDF PNG EPS [CGT]CCG[ACG].[CG]C[AGT] 5' PDF PNG EPS .CTG[AG]A[AGT]AA 5' Y Y PDF PNG EPS .[AG]GGGAT[AG]. 5' PDF PNG EPS [GT][AT]TTTCAA[ACT] 5' Y PDF PNG EPS
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- Combined motif maps for co-localizing motifs
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Motif 1 Motif 2 Location Maps
- Additional information
- Best GO enrichments for motifs
- All GO enrichments for motifs
- All motif occurrences of motifs predicted by FIRE, sorted by putative functionality
Reference
FIRE is a motif discovery and characterization program based on mutual information.