FIRE

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Arr_71_15mMdiamide10min.txt

Summary

FIRE has discovered 4 motifs from the query data, consisting of 4 from DNA and 0 from RNA.

DNA results

Figures
FIRE p-value matrix PDF PNG EPS
FIRE density matrix PDF PNG EPS
FIRE motif interaction matrix PDF PNG EPS
Motif maps
Motif Location    Position   
bias
Orientation
bias
Maps
[CGT]CTCATC[GT]C5'Y PDF PNG EPS
[ACG]CCCC[CT][GT][AGT].5'Y PDF PNG EPS
[AT]T[CT]GCC[AC]C[CT]5'Y PDF PNG EPS
.[GT]CC[CG]CG[CG].5'Y PDF PNG EPS
Additional information
Best GO enrichments for motifs
All GO enrichments for motifs
All motif occurrences of motifs predicted by FIRE, sorted by putative functionality

Reference

FIRE is a motif discovery and characterization program based on mutual information.