Arr_73_15mMdiamide30min.txt
Summary
FIRE has discovered 7 motifs from the query data, consisting of 6 from DNA and 1 from RNA.
Combined DNA and RNA results
- Figures
- FIRE p-value matrix PDF PNG EPS
- FIRE density matrix PDF PNG EPS
- FIRE motif interaction matrix PDF PNG EPS
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- Motif maps
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Motif Location Position
biasOrientation
biasMaps [CGT]CTCATC[GT]C 5' Y PDF PNG EPS [ACG]CCCC[CT][CGT][AGT]. 5' Y PDF PNG EPS [AT][CT]GCCAC[ACT][CGT] 5' Y PDF PNG EPS [ACT]AATTTTC[ACG] 5' Y PDF PNG EPS UGUA[ACU]A[GU]A. 3'UTR Y Y PDF PNG EPS [CT]CC[AG][AGT]ACA[CT] 5' Y Y PDF PNG EPS [CGT]CCC[CT][GT]AA[AT] 5' PDF PNG EPS
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- Combined motif maps for co-localizing motifs
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Motif 1 Motif 2 Location Maps
Additional information for DNA motifs
- Best GO enrichments for motifs
- All GO enrichments for motifs
- All motif occurrences of motifs predicted by FIRE, sorted by putative functionality
Additional information for RNA motifs
- Best GO enrichments for motifs
- All GO enrichments for motifs
- All motif occurrences of motifs predicted by FIRE, sorted by putative functionality
Reference
FIRE is a motif discovery and characterization program based on mutual information.