FIRE

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Arr_9_HeatShock000minuteshs2.txt

Summary

FIRE has discovered 5 motifs from the query data, consisting of 5 from DNA and 0 from RNA.

DNA results

Figures
FIRE p-value matrix PDF PNG EPS
FIRE density matrix PDF PNG EPS
FIRE motif interaction matrix PDF PNG EPS
Motif maps
Motif Location    Position   
bias
Orientation
bias
Maps
[CGT]CTCATC[GT]C5'Y PDF PNG EPS
...AGGGG[CGT]5'Y PDF PNG EPS
[CGT]CCCTTA[ACT].5'Y PDF PNG EPS
[AC]TC[CT]GTAC[AG]5'YY PDF PNG EPS
[ACG][GT]C[CGT]C[CG]GC.5'Y PDF PNG EPS
Additional information
Best GO enrichments for motifs
All GO enrichments for motifs
All motif occurrences of motifs predicted by FIRE, sorted by putative functionality

Reference

FIRE is a motif discovery and characterization program based on mutual information.