FIRE

Arr_9_HeatShock000minuteshs2.txt

Summary

FIRE has discovered 5 motifs from the query data, consisting of 5 from DNA and 0 from RNA.

DNA results

Figures

FIRE p-value matrix PDF PNG EPS

FIRE density matrix PDF PNG EPS

FIRE motif interaction matrix PDF PNG EPS

Motif maps

Motif	Location	Position    bias	Orientation bias	Maps
[CGT]CTCATC[GT]C	5'	Y		PDF	PNG	EPS
...AGGGG[CGT]	5'	Y		PDF	PNG	EPS
[CGT]CCCTTA[ACT].	5'	Y		PDF	PNG	EPS
[AC]TC[CT]GTAC[AG]	5'	Y	Y	PDF	PNG	EPS
[ACG][GT]C[CGT]C[CG]GC.	5'		Y	PDF	PNG	EPS

Additional information

Best GO enrichments for motifs

All GO enrichments for motifs

All motif occurrences of motifs predicted by FIRE, sorted by putative functionality

Reference

FIRE is a motif discovery and characterization program based on mutual information.