FIRE results

These results are also available as PDF and EPS documents.

The motif interaction matrix may also be informative.

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over-representation
1
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
0
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
0
under-representation
C0 C1 C2 C3 C4 C5 motif location mutual information z-score robustness position bias orientation bias conservation index seed motif name protein array
            [ACG][AC]A[AG]UA[AU]A. 3'UTR 0.008 43.6 10/10 Y 0.99 AAAUAAA - -
            .[GU]AAU[AG]AA. 3'UTR 0.004 25.4 10/10 - 1.00 UAAUAAA - -
            .[GT]TGTGAC[AGT] 5' 0.002 12.4 7/10 - 0.91 TTGTGAC NHR_84, NHR_102_NHR_142_NHR_170_NHR_213_NHR_218_NHR_54, MAB_9 ... -
            [AC]AATCG[AC]T. 5' 0.006 35.5 10/10 - 1.00 AATCGAT CEH_28, CEH-38, CEH-28 ... -
            .U[CU]CCC[CU][CG]. 3'UTR 0.004 21.8 10/10 - 1.00 UUCCCCC - -
            T[ACT][CT]CTCTC. 5' 0.003 16.2 10/10 - 0.97 TTCTCTC EOR-1, EOR_1.2, PIE_1 -
            .[AG]TAG[CT]AA[CGT] 5' 0.003 16.8 10/10 - 0.73 ATAGCAA DAF_19, MEF_2, PIE_1 -
            .TTGAAAC[ACT] 5' 0.002 12.4 7/10 - 0.30 TTGAAAC SNPC_4.2, PIE_1 -