FIRE results

These results are also available as PDF and EPS documents.

The motif interaction matrix may also be informative.

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over-representation
10
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
0
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
-10
under-representation
C0 C1 C2 C3 C4 C5 C6 C7 C8 motif location mutual information z-score robustness position bias orientation bias conservation index seed motif name protein array
                  [CT]CT[GT]C[CGT][CT]C[GT] 5' 0.009 42.0 10/10 - 1.00 CTGCGTC FKH_10 -
                  .AATCGAT. 5' 0.009 41.5 10/10 Y 1.00 AATCGAT CEH-38, CEH-28, CEH_28 ... -
                  [ACG][GT]CCACG[AC]. 5' 0.004 18.1 10/10 - 0.99 TCCACGA HLH_28_HLH_29 -
                  [AT]T[GT]TC[CG]CC. 5' 0.003 13.7 9/10 Y 0.33 TTTCCCC LIN-54, PIE_1 -
                  .ATAGT[AGT]A. 5' 0.005 22.0 10/10 - 0.47 ATAGTAA - -
                  .TACCA[AG][ACG][ACT] 5' 0.005 21.3 10/10 - 0.57 TACCAAA TBX_40 -
                  .AGTATA[AC]. 5' 0.004 19.2 10/10 - 0.42 AGTATAA MED_1_MED_2 -
                  .[AG][AGT]GTAGG[CT] 5' 0.003 14.7 10/10 - 0.61 AGGTAGG NHR_2_NHR_85 -
                  [AT].TGATCA. 5' 0.003 15.0 10/10 Y 0.93 ATGATCA NHR_1_NHR_10_NHR_101_NHR_17_NHR_40_NHR_47_NHR_68, EGL_38, PIE_1 ... -
                  .TACGT[ACG][ACG][AGT] 5' 0.003 12.2 9/10 Y - 0.96 TACGTGA ZIP_7, ATF_6 -
                  .[GT][AG]TTAGC[AC] 5' 0.002 9.8 6/10 - - 0.50 TGTTAGC HAM_2, PIE_1 -
                  .ACGGCCG. 5' 0.003 11.8 8/10 - 0.55 ACGGCCG - -