FIRE results

These results are also available as PDF and EPS documents.

The motif interaction matrix may also be informative.

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over-representation
1
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
0
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
0
under-representation
C0 C1 C2 C3 C4 C5 C6 C7 motif location mutual information z-score robustness position bias orientation bias conservation index seed motif name protein array
                [ACG]A[AG][ACG]U[AG]A.[AG] 3'UTR 0.025 126.2 10/10 Y 0.99 AAAUAAA - -
                .TACCA[AGT][AG]. 5' 0.006 31.0 10/10 - 0.90 TACCAAA TBX_40 -
                [AG]CAGGT[CG][ACT]A 5' 0.006 28.1 10/10 Y 0.98 CAGGTGA SNAI_1, UNC-62 -
                .CATAT[ACG]A[AGT] 5' 0.006 28.5 10/10 - 0.73 CATATAA - -
                .[ACT]T[AG]TAGC[ACT] 5' 0.004 20.9 10/10 - 0.51 TTATAGC HAM_2 -
                .ATAGTA[AG]. 5' 0.004 17.8 10/10 - 0.44 ATAGTAA MEF_2, DAF_19 -
                .[ACT]TGTGAC. 5' 0.003 16.3 9/10 - 0.92 TTGTGAC NHR_102_NHR_142_NHR_170_NHR_213_NHR_218_NHR_54, NHR_84, NHR_134_NHR_18_NHR_96 ... -
                .TTA[CG][CT]CA. 5' 0.003 15.1 10/10 - 0.75 TTACTCA JUN_1, PIE_1 -
                .[AC]C[CT]TACA[AGT] 5' 0.003 14.9 10/10 - 0.59 ACTTACA NHR_2_NHR_85 -
                .[CU][CU].CCCC. 3'UTR 0.012 61.1 10/10 Y 1.00 UUUCCCC - -
                [AG][AC]ATCGAT. 5' 0.010 50.8 10/10 - 1.00 AATCGAT CEH_28, CEH-28, CEH_38 ... -
                .[CG][GT]CTC[GT]C[AGT] 5' 0.007 34.0 10/10 Y 0.99 CTCTCTC PIE_1 -
                .[ACG]TCCACG[ACT] 5' 0.003 15.0 10/10 - 0.99 CTCCACG PIE_1 -
                [GT][CGT][CT]GCGGA. 5' 0.003 11.7 6/10 - 0.93 CCGCGGA MADF_9, PIE_1 -