FIRE results

These results are also available as PDF and EPS documents.

The motif interaction matrix may also be informative.

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over-representation
10
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
0
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
-10
under-representation
C0 C1 C2 C3 C4 C5 C6 C7 motif location mutual information z-score robustness position bias orientation bias conservation index seed motif name protein array
                [AG][AC].[AG]UA[AG][ACG][ACG] 3'UTR 0.025 128.0 10/10 Y 0.99 AAAUAAA - -
                .TACATA[CGT]. 5' 0.008 42.6 10/10 - 0.95 TACATAC - -
                [ACT][AG]CCT[AG]C[CT][AT] 5' 0.006 31.1 10/10 - 0.75 GCCTACC - -
                [AGT]ACAG[GT]T[ACG]. 5' 0.005 26.7 10/10 Y 0.94 ACAGGTG SNAI_1 -
                [AT][AT]AG[GT]TTG. 5' 0.004 22.3 10/10 - 0.57 AAGTTTG DMD_9, PIE_1 -
                [AT]CTGA[CT][AC]A[CGT] 5' 0.003 14.5 10/10 Y 0.99 CTGATAA NHR_216, NHR_1_NHR_10_NHR_101_NHR_17_NHR_40_NHR_47_NHR_68, PQM-1 ... -
                .TACGTG[AC][ACT] 5' 0.003 14.1 9/10 - 0.98 TACGTGA XBP_1 -
                [ACT][CT]CTGGTA. 5' 0.003 11.2 6/10 - - 0.53 CCTGGTA - -
                .[ACU][CU][CU]CCCC. 3'UTR 0.014 70.7 10/10 Y 1.00 UUUCCCC - -
                [ACG]AATCGAT. 5' 0.012 65.2 10/10 - 1.00 AATCGAT CEH_28, CEH-28, CEH_38 ... -
                TC[CGT][GT]C[GT][CT]C[GT] 5' 0.011 56.2 10/10 - 0.99 CTGCGTC PIE_1 -
                [AT]TT[CGT]CC[CG]C. 5' 0.005 23.8 10/10 Y 0.71 TTTCCCC EFL_1.3, EFL-1_EFL_1.2, EFL-1 ... -
                .ACG[AG]C[AG]C[GT] 5' 0.003 13.3 9/10 - 1.00 ACGACAC - -
                [ACG]TCCACG[AC]. 5' 0.003 15.7 10/10 - 0.98 TCCACGA PIE_1, HLH_28_HLH_29 -
                .G[CGT]TAACC. 5' 0.002 8.7 6/10 - - 0.36 GGTAACC PIE_1 -