FIRE results

These results are also available as PDF and EPS documents.

The motif interaction matrix may also be informative.

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over-representation
1
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
0
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
0
under-representation
C0 C1 C2 C3 C4 C5 C6 C7 motif location mutual information z-score robustness position bias orientation bias conservation index seed motif name protein array
                [AGU][AU]C[ACG]A[AG][AG][AG][ACG] 3'UTR 0.011 55.5 10/10 Y 0.95 UCAAAAA - -
                [ACG]CAGGTG[AC][AT] 5' 0.003 15.0 9/10 Y 0.99 CAGGTGA SNAI_1 -
                [CGT][AT]T[AG]TGAC[ACG] 5' 0.003 13.6 8/10 - 0.95 TTGTGAC NHR_102_NHR_142_NHR_170_NHR_213_NHR_218_NHR_54, ATF_7, PIE_1 ... -
                [ACT]A[CGT]TATAG. 5' 0.003 12.4 8/10 - 0.61 ATTATAG - -
                [ACT]AACTG[AT]T[AC] 5' 0.003 11.6 10/10 - - 0.44 AACTGAT NHR_46, PIE_1, EGL_27 ... -
                [AG]A[AT]TCG[AT][CT][AG] 5' 0.006 28.6 10/10 - 1.00 AATCGAT PIE_1 -
                [GT]CT[GT]C[CGT]TC[AGT] 5' 0.003 15.0 10/10 - 1.00 CTTCTTC PIE_1, EOR-1 -
                [AG]AA[ACT]AGGG. 5' 0.002 11.0 7/10 - 0.45 AAAAGGG PIE_1, FEZF_1 -