FIRE results

These results are also available as PDF and EPS documents.

The motif interaction matrix may also be informative.

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over-representation
1
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
0
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
0
under-representation
C0 C1 C2 C3 C4 C5 C6 C7 motif location mutual information z-score robustness position bias orientation bias conservation index seed motif name protein array
                [AG][AG][ACU][AU]A[AC][AU][AGU]G 3'UTR 0.008 41.2 10/10 Y 0.97 AAAAAUU - -
                .A[AT]GATCA[ACG] 5' 0.003 12.3 8/10 - 0.94 ATGATCA NHR_1_NHR_10_NHR_101_NHR_17_NHR_40_NHR_47_NHR_68, NHR_119_NHR_31_NHR_7, PIE_1 -
                [ACG][ACG]ATCGAT[AT] 5' 0.004 21.8 10/10 - 1.00 AATCGAT CEH_28, CEH-28, CEH_38 ... -
                .[ACU]UCCCCC. 3'UTR 0.004 20.6 10/10 - 0.99 AUCCCCC - -
                .CTCT[GT]C[CG]. 5' 0.003 12.4 8/10 Y 0.90 CTCTTCC EOR_1.2, EOR-1, PIE_1 -
                .TATGC[CT][AC][ACG] 5' 0.003 13.7 9/10 - 0.70 TATGCTA - -
                [AGT]A[CG]CAAAC[AGT] 5' 0.002 10.8 8/10 - - 0.68 ACCAAAC PIE_1 -
                [AC][CT][AT]A[CG]ATA. 5' 0.003 14.1 10/10 - 0.83 TAAGATA - -