FIRE results

These results are also available as PDF and EPS documents.

The motif interaction matrix may also be informative.

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over-representation
10
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
0
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
-10
under-representation
C0 C1 C2 C3 C4 C5 C6 C7 motif location mutual information z-score robustness position bias orientation bias conservation index seed motif name protein array
                [ACG]A[ACG][AG][GU]AA[ACG][ACG] 3'UTR 0.021 104.7 10/10 Y 0.99 AAAUAAA - -
                .TACC[AT][ACT][AG][CGT] 5' 0.005 26.1 10/10 - 0.84 TACCAAA - -
                [ACT][AT]A[AG]GTTC. 5' 0.004 19.1 10/10 - 0.73 AAAGTTC PIE_1, LIN-14, LIN-14_LIN_14 -
                [AGT]AC[ACT]A[AC]TG[AT] 5' 0.004 17.2 9/10 - 0.49 ACAAATG - -
                [CGT]T[CT][ACG]TGAC[ACG] 5' 0.003 16.4 9/10 Y 0.45 TTGTGAC PIE_1, NHR_102_NHR_142_NHR_170_NHR_213_NHR_218_NHR_54 -
                [ACG][AT]AACATC[ACT] 5' 0.003 15.5 10/10 - 0.88 AAACATC FKH-9, PIE_1 -
                [AG][AC]ATCGAT[AGT] 5' 0.009 47.9 10/10 Y 1.00 AATCGAT CEH_28, CEH-28, CEH_38 ... -
                .[ACU]U[CU]CCCC. 3'UTR 0.007 33.6 10/10 Y 1.00 UUUCCCC - -
                .[CT]TC[CT]C[GT]C[GT] 5' 0.004 18.0 10/10 - 0.94 TTCTCTC PIE_1 -
                .CTCC[AG]CG. 5' 0.003 14.6 10/10 - 0.97 CTCCGCG PIE_1 -
                [AG][AC][CG][CT]GTCG[AT] 5' 0.003 11.4 7/10 - - 0.99 AGTGTCG PIE_1 -