Arr_3_HeatShock15minuteshs1.txt
Summary
FIRE has discovered 8 motifs from the query data, consisting of 7 from DNA and 1 from RNA.
Combined DNA and RNA results
- Figures
- FIRE p-value matrix PDF PNG EPS
- FIRE density matrix PDF PNG EPS
- FIRE motif interaction matrix PDF PNG EPS
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- Motif maps
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Motif Location Position
biasOrientation
biasMaps [CGT]CTCATC[GT][AC] 5' Y PDF PNG EPS [ACG]CCCC[CT][GT].. 5' Y PDF PNG EPS .[AT]T[AT]AGGG[AG] 5' Y Y PDF PNG EPS [AG]AA[AGT]TTTC[AC] 5' Y PDF PNG EPS [CT]CC[AG]TACA[CT] 5' Y Y PDF PNG EPS [AGT]AA.AGGG[AGT] 5' Y PDF PNG EPS .ATTTTTC. 5' Y PDF PNG EPS [ACU][AG]C[AC]CAC[ACG][ACU] 3'UTR Y PDF PNG EPS
Additional information for DNA motifs
- Best GO enrichments for motifs
- All GO enrichments for motifs
- All motif occurrences of motifs predicted by FIRE, sorted by putative functionality
Additional information for RNA motifs
- Best GO enrichments for motifs
- All GO enrichments for motifs
- All motif occurrences of motifs predicted by FIRE, sorted by putative functionality
Reference
FIRE is a motif discovery and characterization program based on mutual information.