FIRE-pro
Supplementary web site for “Large-scale discovery and characterization of protein regulatory motifs in eukaryotes”
Daniel S. Lieber, Olivier Elemento and Saeed Tavazoie
Lewis-Sigler Institute for Integrative Genomics, Princeton University
IGET: Use FIRE-pro online
FIRE-pro is the protein motif discovery component of IGET, an integrated platform for exploring large-scale gene expression and protein behavior dynamics. Use IGET to discover motifs, pathways, and interactions.
To contact us: D. Lieber, O. Elemento, S. Tavazoie
PLoS One. 2010 December 29;5(12):e14444 PDF.
How can I use FIRE-pro?
FIRE-pro can be downloaded and installed on a Unix (or Cygwin) machine. Click here to download FIRE-pro.
FIRE-pro can also be used online. Click here for the online FIRE-pro application (created by Bambi Tsui, Princeton).
FIRE-pro is a powerful program, with many options and many output files. Click here for a tutorial on how to install and use FIRE-pro.
If you encounter a bug in the FIRE-pro package, please contact us.